Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN590_20460 | Not Available | Negative | 4130104 - 4130649 | 20878.7 |
| hypothetical protein | DN590_20465 | Not Available | Positive | 4130838 - 4131038 | 7224.61 |
| rho-binding antiterminator | DN590_20470 | Not Available | Positive | 4131025 - 4131285 | 9589.35 |
| trna lysidine(34) synthetase tils | DN590_20475 | Not Available | Negative | 4131350 - 4132642 | 47993.7 |
| voc family protein | DN590_20480 | Not Available | Negative | 4132704 - 4133093 | 14726.6 |
| lysine decarboxylase ldcc | DN590_20485 | Not Available | Negative | 4133160 - 4135298 | 80494.7 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | DN590_20490 | Not Available | Negative | 4135398 - 4136357 | 35287.6 |
| dna polymerase iii subunit alpha | DN590_20495 | Not Available | Negative | 4136370 - 4139852 | 130176.0 |
| ribonuclease hii | DN590_20500 | Not Available | Negative | 4139877 - 4140473 | 21467.1 |
| lipid-a-disaccharide synthase | DN590_20505 | Not Available | Negative | 4140470 - 4141618 | 42416.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

