Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| propanediol utilization microcompartment protein pduu | DN590_20250 | Not Available | Positive | 4092679 - 4093029 | 12501.3 |
| ethanolamine utilization protein eutp | DN590_20255 | Not Available | Positive | 4093034 - 4093486 | 16321.8 |
| acetate/propionate family kinase | DN590_20260 | Not Available | Positive | 4093471 - 4094685 | 43717.7 |
| ghmp kinase | DN590_20265 | Not Available | Positive | 4094778 - 4095644 | 31697.0 |
| duf496 family protein | DN590_20270 | Not Available | Negative | 4095685 - 4096020 | 12976.7 |
| fusc family protein | DN590_20275 | Not Available | Negative | 4096259 - 4097317 | 39700.6 |
| dna gyrase inhibitor sbmc | DN590_20280 | Not Available | Negative | 4097425 - 4097892 | 17900.2 |
| serine-type d-ala-d-ala carboxypeptidase dacd | DN590_20285 | Not Available | Negative | 4098016 - 4099188 | 43126.5 |
| thiosulfate reductase cytochrome b subunit | DN590_20290 | Not Available | Negative | 4099328 - 4100095 | 28524.8 |
| thiosulfate reductase electron transport protein phsb | DN590_20295 | Not Available | Negative | 4100092 - 4100670 | 21587.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

