Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| propanediol utilization microcompartment protein pdua | DN590_20200 | Not Available | Positive | 4085098 - 4085373 | 9054.02 |
| bmc domain-containing protein | DN590_20205 | Not Available | Positive | 4085398 - 4085862 | 16079.3 |
| propanediol utilization protein | DN590_20210 | Not Available | Positive | 4085862 - 4086494 | 22910.7 |
| microcompartment protein pdum | DN590_20215 | Not Available | Positive | 4086491 - 4086982 | 18395.7 |
| ethanolamine utilization protein eutn | DN590_20220 | Not Available | Positive | 4086986 - 4087261 | 9206.1 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | DN590_20225 | Not Available | Positive | 4087270 - 4088265 | 36244.4 |
| aldehyde dehydrogenase eute | DN590_20230 | Not Available | Positive | 4088262 - 4089647 | 48625.0 |
| propanediol utilization protein | DN590_20235 | Not Available | Positive | 4089658 - 4090770 | 39732.0 |
| electron transport complex protein rnfc | DN590_20240 | Not Available | Positive | 4090767 - 4092122 | 48343.2 |
| bmc domain-containing protein | DN590_20245 | Not Available | Positive | 4092125 - 4092679 | 19039.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

