Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system transcriptional repressor | DN590_00500 | Not Available | Positive | 95445 - 96083 | 23238.9 |
| thioredoxin-dependent thiol peroxidase | DN590_00505 | Not Available | Positive | 96083 - 96553 | 17643.9 |
| beta-aspartyl-peptidase | DN590_00510 | Not Available | Negative | 96661 - 97824 | 41145.6 |
| hypothetical protein | DN590_00515 | Not Available | Negative | 97836 - 98297 | 16010.3 |
| hypothetical protein | DN590_00520 | Not Available | Negative | 98299 - 98958 | 23372.7 |
| ai-2e family transporter | DN590_00525 | Not Available | Negative | 99125 - 100189 | 39374.1 |
| beta-barrel assembly-enhancing protease | DN590_00530 | Not Available | Positive | 100416 - 101879 | 53877.0 |
| arsenate reductase (glutaredoxin) | DN590_00535 | Not Available | Positive | 102003 - 102362 | 13333.3 |
| dnaa inactivator hda | DN590_00540 | Not Available | Negative | 102398 - 103123 | 27447.2 |
| uracil permease | DN590_00545 | Not Available | Negative | 103195 - 104484 | 45124.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

