Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sirohydrochlorin cobaltochelatase | DN590_20100 | Not Available | Negative | 4066467 - 4067261 | 29022.0 |
| cobalt-precorrin-6a reductase | DN590_20105 | Not Available | Negative | 4067272 - 4068057 | 28441.3 |
| precorrin-3b c(17)-methyltransferase | DN590_20110 | Not Available | Negative | 4068054 - 4068779 | 25897.9 |
| cobalt-precorrin 5a hydrolase | DN590_20115 | Not Available | Negative | 4068779 - 4069834 | 37976.2 |
| cobalt-precorrin-4 methyltransferase | DN590_20120 | Not Available | Negative | 4069815 - 4070588 | 28286.8 |
| decarboxylating cobalt-precorrin-6b (c(15))-methyltransferase | DN590_20125 | Not Available | Negative | 4070581 - 4071150 | 20570.0 |
| cobalt-precorrin-7 (c(5))-methyltransferase | DN590_20130 | Not Available | Negative | 4071140 - 4071745 | 22029.8 |
| cobalt-precorrin-5b (c(1))-methyltransferase | DN590_20135 | Not Available | Negative | 4071739 - 4072875 | 40861.5 |
| cobalt-precorrin-8 methylmutase | DN590_20140 | Not Available | Negative | 4072872 - 4073504 | 22867.5 |
| cobalamin biosynthesis protein | DN590_20145 | Not Available | Negative | 4073515 - 4074474 | 35506.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

