Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-succinylbenzoate synthase | DN590_19900 | Not Available | Negative | 4026263 - 4027225 | 35175.2 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | DN590_19905 | Not Available | Negative | 4027225 - 4028082 | 31577.8 |
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | DN590_19910 | Not Available | Negative | 4028097 - 4028855 | 28028.4 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | DN590_19915 | Not Available | Negative | 4028852 - 4030522 | 61254.3 |
| isochorismate synthase menf | DN590_19920 | Not Available | Negative | 4030610 - 4031908 | 48777.3 |
| duf883 domain-containing protein | DN590_19925 | Not Available | Negative | 4032013 - 4032318 | 11531.6 |
| gnat family n-acetyltransferase | DN590_19930 | Not Available | Negative | 4032382 - 4032843 | 17283.6 |
| ribonuclease z | DN590_19935 | Not Available | Positive | 4032911 - 4033828 | 32994.5 |
| chemotaxis protein chev | DN590_19940 | Not Available | Positive | 4033893 - 4034897 | 37126.1 |
| nadh-quinone oxidoreductase subunit nuon | DN590_19945 | Not Available | Negative | 4034956 - 4036413 | 51996.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

