Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside triphosphatase nudi | DN590_19850 | Not Available | Positive | 4016393 - 4016818 | 16097.2 |
| udp-4-amino-4-deoxy-l-arabinose aminotransferase | DN590_19855 | Not Available | Positive | 4017104 - 4018243 | 41438.0 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | DN590_19860 | Not Available | Positive | 4018246 - 4019229 | 36579.6 |
| bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arna | DN590_19865 | Not Available | Positive | 4019226 - 4021208 | 73968.4 |
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase | DN590_19870 | Not Available | Positive | 4021205 - 4022107 | 33325.8 |
| lipid iv(a) 4-amino-4-deoxy-l-arabinosyltransferase | DN590_19875 | Not Available | Positive | 4022104 - 4023762 | 62649.3 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arne | DN590_19880 | Not Available | Positive | 4023759 - 4024094 | 12311.7 |
| 4-amino-4-deoxy-l-arabinose-phospho-udp flippase | DN590_19885 | Not Available | Positive | 4024094 - 4024480 | 13741.5 |
| signal transduction protein pmrd | DN590_19890 | Not Available | Negative | 4024483 - 4024746 | 10067.3 |
| o-succinylbenzoate--coa ligase | DN590_19895 | Not Available | Negative | 4024842 - 4026221 | 50553.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

