Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DN590_19800 | Not Available | Negative | 4004050 - 4005240 | 42861.1 |
| lysr family transcriptional regulator | DN590_19805 | Not Available | Positive | 4005401 - 4006279 | 32199.2 |
| glycerophosphodiester phosphodiesterase | DN590_19810 | Not Available | Negative | 4006341 - 4007408 | 40493.3 |
| glycerol-3-phosphate transporter | DN590_19815 | Not Available | Negative | 4007412 - 4008770 | 50178.0 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit a | DN590_19820 | Not Available | Positive | 4009041 - 4010669 | 59188.7 |
| glycerol-3-phosphate dehydrogenase subunit glpb | DN590_19825 | Not Available | Positive | 4010659 - 4011918 | 45633.0 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit c | DN590_19830 | Not Available | Positive | 4011915 - 4013105 | 44117.3 |
| isncy family transposase | DN590_19835 | Not Available | Positive | 4013289 - 4014218 | 35380.6 |
| competence/damage-inducible protein cina | DN590_19840 | Not Available | Negative | 4014257 - 4015453 | 44063.1 |
| hypothetical protein | DN590_19845 | Not Available | Negative | 4015533 - 4016075 | 18587.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

