Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| drug/metabolite dmt transporter permease | DN590_19385 | Not Available | Negative | 3908370 - 3909251 | 31410.3 |
| sulfate abc transporter substrate-binding protein | DN590_19390 | Not Available | Positive | 3909540 - 3910127 | 21552.0 |
| formate dehydrogenase-n subunit alpha | DN590_19395 | Not Available | Positive | 3910176 - 3912587 | 89740.6 |
| formate dehydrogenase subunit beta | DN590_19400 | Not Available | Positive | 3912601 - 3913485 | 32333.5 |
| formate dehydrogenase-n subunit gamma | DN590_19405 | Not Available | Positive | 3913478 - 3914134 | 25614.3 |
| inorganic diphosphatase | DN590_19410 | Not Available | Positive | 3914264 - 3914866 | 22221.7 |
| addiction module antidote protein, higa family | DN590_19415 | Not Available | Negative | 3914906 - 3915190 | 10371.7 |
| killer protein | DN590_19420 | Not Available | Negative | 3915190 - 3915468 | 10667.9 |
| abc transporter atp-binding protein | DN590_19425 | Not Available | Negative | 3915690 - 3917405 | 63729.2 |
| nad-dependent malic enzyme | DN590_19430 | Not Available | Negative | 3917715 - 3919412 | 63262.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

