Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 8-oxo-dgtp diphosphatase mutt | DN590_18740 | Not Available | Positive | 3783002 - 3783391 | 14603.3 |
| dna gyrase inhibitor yacg | DN590_18745 | Not Available | Negative | 3783565 - 3783759 | 7232.4 |
| cell division protein zapd | DN590_18750 | Not Available | Negative | 3783769 - 3784512 | 28304.2 |
| dephospho-coa kinase | DN590_18755 | Not Available | Negative | 3784512 - 3785132 | 22823.2 |
| gmp reductase | DN590_18760 | Not Available | Positive | 3785358 - 3786401 | 37189.7 |
| type iv pilin biogenesis protein | DN590_18765 | Not Available | Negative | 3786459 - 3787661 | 44476.1 |
| type ii secretion system protein gspe | DN590_18770 | Not Available | Negative | 3787651 - 3789036 | 50682.2 |
| prepilin peptidase-dependent pilin | DN590_18775 | Not Available | Negative | 3789046 - 3789483 | 15673.8 |
| carboxylating nicotinate-nucleotide diphosphorylase | DN590_18780 | Not Available | Negative | 3789727 - 3790620 | 32944.2 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | DN590_18785 | Not Available | Positive | 3790708 - 3791271 | 20858.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

