Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsw | DN590_18690 | Not Available | Positive | 3770315 - 3771559 | 45876.8 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | DN590_18695 | Not Available | Positive | 3771556 - 3772623 | 37789.8 |
| udp-n-acetylmuramate--l-alanine ligase | DN590_18700 | Not Available | Positive | 3772675 - 3774150 | 53285.7 |
| d-alanine--d-alanine ligase | DN590_18705 | Not Available | Positive | 3774143 - 3775063 | 32830.6 |
| cell division protein ftsq | DN590_18710 | Not Available | Positive | 3775065 - 3775898 | 31305.3 |
| cell division protein ftsa | DN590_18715 | Not Available | Positive | 3775895 - 3777157 | 45289.6 |
| cell division protein ftsz | DN590_18720 | Not Available | Positive | 3777220 - 3778371 | 40386.4 |
| udp-3-o-acyl-n-acetylglucosamine deacetylase | DN590_18725 | Not Available | Positive | 3778472 - 3779389 | 33959.8 |
| seca regulator secm | DN590_18730 | Not Available | Positive | 3779673 - 3780179 | 18451.2 |
| preprotein translocase subunit seca | DN590_18735 | Not Available | Positive | 3780240 - 3782945 | 101834.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

