Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (uracil(1498)-n(3))-methyltransferase | DN590_18585 | Not Available | Positive | 3750809 - 3751540 | 26941.6 |
| glutathione synthase | DN590_18590 | Not Available | Positive | 3751560 - 3752507 | 35437.9 |
| yqge/algh family protein | DN590_18595 | Not Available | Positive | 3752684 - 3753247 | 20778.1 |
| holliday junction resolvase ruvx | DN590_18600 | Not Available | Positive | 3753247 - 3753663 | 15107.0 |
| type iv pili twitching motility protein pilt | DN590_18605 | Not Available | Negative | 3753660 - 3754640 | 35868.1 |
| duf3828 domain-containing protein | DN590_18615 | Not Available | Negative | 3754834 - 3755253 | 15942.1 |
| hypothetical protein | DN590_18620 | Not Available | Negative | 3755253 - 3755612 | 13338.7 |
| transcriptional regulator leuo | DN590_18625 | Not Available | Positive | 3756179 - 3757126 | 35785.0 |
| acetolactate synthase 3 large subunit | DN590_18630 | Not Available | Positive | 3757445 - 3759169 | 62995.0 |
| acetolactate synthase small subunit | DN590_18635 | Not Available | Positive | 3759172 - 3759663 | 18062.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

