Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ecf transporter s component | DN590_18475 | Not Available | Positive | 3730197 - 3730775 | 20294.9 |
| energy-coupling factor transporter transmembrane protein ecft | DN590_18480 | Not Available | Positive | 3730776 - 3731483 | 26591.3 |
| abc transporter atp-binding protein | DN590_18485 | Not Available | Positive | 3731471 - 3732148 | 24935.0 |
| abc transporter atp-binding protein | DN590_18490 | Not Available | Positive | 3732142 - 3732825 | 25147.1 |
| nucleoside/nucleotide kinase family protein | DN590_18495 | Not Available | Negative | 3732782 - 3733492 | 26893.9 |
| transcriptional regulator | DN590_18500 | Not Available | Negative | 3733489 - 3733998 | 19117.8 |
| class ii fructose-bisphosphatase | DN590_18505 | Not Available | Negative | 3734014 - 3734985 | 34339.9 |
| l-sorbose 1-phosphate reductase | DN590_18510 | Not Available | Negative | 3734982 - 3736259 | 45524.7 |
| pts mannitol transporter subunit iibc | DN590_18515 | Not Available | Negative | 3736284 - 3737663 | 48871.9 |
| pts mannitol transporter subunit iia | DN590_18520 | Not Available | Negative | 3737691 - 3738134 | 15922.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

