Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa hydrolase/transferase family protein | DN590_18425 | Not Available | Positive | 3720769 - 3722235 | 52996.6 |
| lysr family transcriptional regulator | DN590_18430 | Not Available | Negative | 3722232 - 3723128 | 34338.4 |
| oxidative stress defense protein | DN590_18435 | Not Available | Negative | 3723252 - 3723998 | 26676.7 |
| arginine exporter argo | DN590_18440 | Not Available | Negative | 3724092 - 3724727 | 23195.1 |
| mechanosensitive ion channel protein mscs | DN590_18445 | Not Available | Negative | 3724921 - 3725781 | 31159.1 |
| class ii fructose-bisphosphate aldolase | DN590_18450 | Not Available | Negative | 3725973 - 3727052 | 39126.4 |
| phosphoglycerate kinase | DN590_18455 | Not Available | Negative | 3727141 - 3728304 | 41033.5 |
| erythrose-4-phosphate dehydrogenase | DN590_18460 | Not Available | Negative | 3728344 - 3729372 | 37523.8 |
| erythrose 4-phosphate dehydrogenase | DN590_18465 | Not Available | Negative | 3729350 - 3729427 | 2998.49 |
| duf296 domain-containing protein | DN590_18470 | Not Available | Positive | 3729747 - 3730172 | 15149.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

