Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin iii family protein | DN590_18305 | Not Available | Negative | 3698101 - 3698763 | 23895.2 |
| asch domain-containing protein | DN590_18310 | Not Available | Negative | 3698927 - 3699238 | 11953.1 |
| murr/rpir family transcriptional regulator | DN590_18315 | Not Available | Positive | 3699291 - 3700019 | 27263.8 |
| 6-phospho-beta-glucosidase | DN590_18320 | Not Available | Positive | 3700140 - 3701573 | 55203.4 |
| nad(p)-dependent oxidoreductase | DN590_18325 | Not Available | Negative | 3701667 - 3702410 | 25965.0 |
| aminomethyl-transferring glycine dehydrogenase | DN590_18330 | Not Available | Negative | 3702488 - 3705361 | 104395.0 |
| glycine cleavage system protein gcvh | DN590_18335 | Not Available | Negative | 3705489 - 3705878 | 13767.8 |
| glycine cleavage system aminomethyltransferase gcvt | DN590_18340 | Not Available | Negative | 3705904 - 3706998 | 40264.2 |
| fad-dependent 2-octaprenylphenol hydroxylase | DN590_18350 | Not Available | Negative | 3707451 - 3708653 | 44099.1 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | DN590_18355 | Not Available | Negative | 3708769 - 3709947 | 42562.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

