Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2919 domain-containing protein | DN590_00300 | Not Available | Negative | 54828 - 55277 | 16971.2 |
| gnat family acetyltransferase | DN590_00305 | Not Available | Negative | 55264 - 55689 | 16366.6 |
| n-acetylmuramoyl-l-alanine amidase amia | DN590_00310 | Not Available | Positive | 55902 - 56771 | 31349.8 |
| oxygen-dependent coproporphyrinogen oxidase | DN590_00315 | Not Available | Positive | 56774 - 57673 | 34498.4 |
| hth-type transcriptional regulator eutr | DN590_00325 | Not Available | Negative | 57769 - 58821 | 40137.0 |
| ethanolamine utilization microcompartment protein eutk | DN590_00330 | Not Available | Negative | 58870 - 59400 | 18904.6 |
| ethanolamine utilization microcompartment protein eutl | DN590_00335 | Not Available | Negative | 59412 - 60071 | 22739.0 |
| ethanolamine ammonia-lyase subunit eutc | DN590_00340 | Not Available | Negative | 60081 - 60977 | 32184.7 |
| ethanolamine ammonia-lyase heavy chain | DN590_00345 | Not Available | Negative | 60998 - 62359 | 49484.0 |
| ethanolamine ammonia-lyase reactivating factor euta | DN590_00350 | Not Available | Negative | 62371 - 63774 | 49392.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

