Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoprenoid biosynthesis protein elbb | DN590_17735 | Not Available | Negative | 3574097 - 3574750 | 22922.8 |
| aerobic respiration two-component sensor histidine kinase arcb | DN590_17740 | Not Available | Negative | 3574980 - 3577316 | 87973.1 |
| tigr01212 family radical sam protein | DN590_17745 | Not Available | Negative | 3577512 - 3578441 | 34592.6 |
| glutamate synthase large subunit | DN590_17750 | Not Available | Positive | 3579090 - 3583586 | 164555.0 |
| glutamate synthase small subunit | DN590_17755 | Not Available | Positive | 3583599 - 3585017 | 52130.3 |
| cytosine permease | DN590_17760 | Not Available | Positive | 3585265 - 3586515 | 43335.5 |
| cytosine deaminase | DN590_17765 | Not Available | Positive | 3586505 - 3587785 | 47784.1 |
| yhch/yjgk/yial family protein | DN590_17770 | Not Available | Negative | 3587844 - 3588311 | 17301.1 |
| n-acetylmannosamine kinase | DN590_17775 | Not Available | Negative | 3588314 - 3589183 | 29592.7 |
| mfs transporter | DN590_17780 | Not Available | Negative | 3589280 - 3590770 | 53791.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

