Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 3541649 - 3541725 | Not Available |
| argininosuccinate synthase | DN590_17535 | Not Available | Positive | 3542059 - 3543402 | 49855.3 |
| Trna-leu | Not Available | Not Available | Positive | 3543600 - 3543686 | Not Available |
| preprotein translocase subunit secg | DN590_17545 | Not Available | Negative | 3543696 - 3544028 | 11357.8 |
| lysr family transcriptional regulator | DN590_17550 | Not Available | Negative | 3544196 - 3545089 | 34196.3 |
| beta-aspartyl-peptidase | DN590_17555 | Not Available | Positive | 3545238 - 3546371 | 39886.4 |
| c4-dicarboxylate abc transporter | DN590_17560 | Not Available | Positive | 3546382 - 3547848 | 51775.5 |
| phosphoglucosamine mutase | DN590_17565 | Not Available | Negative | 3547893 - 3549230 | 47572.5 |
| dihydropteroate synthase | DN590_17570 | Not Available | Negative | 3549223 - 3550071 | 30682.1 |
| atp-dependent zinc metalloprotease ftsh | DN590_17575 | Not Available | Negative | 3550170 - 3552104 | 70710.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

