Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator ptsj | DN590_00250 | Not Available | Positive | 45183 - 46475 | 46265.4 |
| glutamine amidotransferase | DN590_00255 | Not Available | Positive | 46489 - 47205 | 26672.5 |
| cysteine synthase cysm | DN590_00260 | Not Available | Negative | 47287 - 48198 | 32703.3 |
| sulfate/thiosulfate abc transporter atp-binding protein cysa | DN590_00265 | Not Available | Negative | 48266 - 49363 | 40996.3 |
| sulfate/thiosulfate abc transporter permease cysw | DN590_00270 | Not Available | Negative | 49353 - 50228 | 32516.4 |
| sulfate/thiosulfate abc transporter permease cyst | DN590_00275 | Not Available | Negative | 50228 - 51061 | 30284.6 |
| sulfate abc transporter substrate-binding protein | DN590_00280 | Not Available | Negative | 51062 - 52078 | 37827.1 |
| oxidoreductase ucpa | DN590_00285 | Not Available | Negative | 52236 - 53027 | 27928.6 |
| dyp-type peroxidase | DN590_00290 | Not Available | Negative | 53200 - 54099 | 33124.2 |
| rpoe-regulated lipoprotein | DN590_00295 | Not Available | Negative | 54193 - 54768 | 20609.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

