Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase i | DN590_17325 | Not Available | Negative | 3500369 - 3503155 | 103246.0 |
| acyltransferase | DN590_17330 | Not Available | Positive | 3503519 - 3504454 | 36031.9 |
| thiol:disulfide interchange protein dsba | DN590_17335 | Not Available | Negative | 3504468 - 3505091 | 22957.6 |
| serine/threonine protein kinase | DN590_17340 | Not Available | Negative | 3505108 - 3506094 | 38261.5 |
| hypothetical protein | DN590_17345 | Not Available | Negative | 3506171 - 3506440 | 10291.5 |
| molybdenum cofactor guanylyltransferase moba | DN590_17350 | Not Available | Positive | 3506510 - 3507094 | 21707.3 |
| molybdopterin-guanine dinucleotide biosynthesis protein b | DN590_17355 | Not Available | Positive | 3507091 - 3507594 | 18542.5 |
| colicin immunity protein | DN590_17365 | Not Available | Negative | 3507842 - 3507952 | 4065.27 |
| galactarate dehydratase | DN590_17370 | Not Available | Positive | 3508212 - 3509783 | 56315.8 |
| tagatose bisphosphate family class ii aldolase | DN590_17375 | Not Available | Positive | 3509962 - 3510816 | 30807.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

