Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aquaporin | DN590_16965 | Not Available | Positive | 3431298 - 3432143 | 29753.7 |
| glycerol kinase | DN590_16970 | Not Available | Positive | 3432166 - 3433674 | 56073.7 |
| class ii fructose-bisphosphatase | DN590_16975 | Not Available | Positive | 3433810 - 3434820 | 35758.3 |
| ferredoxin--nadp(+) reductase | DN590_16980 | Not Available | Positive | 3434916 - 3435662 | 27733.5 |
| duf805 domain-containing protein | DN590_16985 | Not Available | Negative | 3435720 - 3436148 | 16103.1 |
| duf1454 family protein | DN590_16990 | Not Available | Positive | 3436249 - 3436851 | 21817.2 |
| triose-phosphate isomerase | DN590_16995 | Not Available | Positive | 3437080 - 3437847 | 26819.2 |
| anion permease | DN590_17000 | Not Available | Negative | 3437887 - 3439359 | 52176.2 |
| citrate transporter | DN590_17005 | Not Available | Negative | 3439473 - 3440777 | 46231.0 |
| cdp-diacylglycerol diphosphatase | DN590_17010 | Not Available | Negative | 3440851 - 3441600 | 28091.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

