Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator cytr | DN590_16915 | Not Available | Positive | 3423808 - 3424833 | 37510.6 |
| hypothetical protein | DN590_16920 | Not Available | Negative | 3424814 - 3424993 | 6293.76 |
| cell division protein ftsn | DN590_16925 | Not Available | Positive | 3424927 - 3425901 | 36466.0 |
| atp-dependent protease subunit hslv | DN590_16930 | Not Available | Positive | 3425993 - 3426523 | 19028.9 |
| hslu--hslv peptidase atpase subunit | DN590_16935 | Not Available | Positive | 3426533 - 3427864 | 49606.8 |
| 1,4-dihydroxy-2-naphthoate polyprenyltransferase | DN590_16940 | Not Available | Positive | 3427932 - 3428861 | 33684.1 |
| ribonuclease e activity regulator rraa | DN590_16945 | Not Available | Positive | 3428954 - 3429439 | 17419.4 |
| hypothetical protein | DN590_16950 | Not Available | Negative | 3429477 - 3429866 | 15309.5 |
| hypothetical protein | DN590_16955 | Not Available | Negative | 3429863 - 3430531 | 25961.8 |
| septal ring assembly protein zapb | DN590_16960 | Not Available | Negative | 3430624 - 3430869 | 9531.27 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

