Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:other | Not Available | Not Available | Positive | 35916 - 36099 | Not Available |
| dna ligase | DN590_00205 | Not Available | Negative | 35661 - 37676 | 73572.4 |
| cell division protein zipa | DN590_00210 | Not Available | Negative | 37748 - 38758 | 37524.5 |
| sulfate transporter cysz | DN590_00215 | Not Available | Positive | 38989 - 39750 | 28978.3 |
| cysteine synthase a | DN590_00220 | Not Available | Positive | 39914 - 40885 | 34520.7 |
| phosphocarrier protein hpr | DN590_00225 | Not Available | Positive | 41269 - 41526 | 9119.89 |
| phosphoenolpyruvate-protein phosphotransferase ptsi | DN590_00230 | Not Available | Positive | 41572 - 43299 | 63435.3 |
| glucose-specific phosphotransferase enzyme iia component | DN590_00235 | Not Available | Positive | 43340 - 43849 | 18248.1 |
| cytoplasmic protein | DN590_00240 | Not Available | Negative | 43998 - 44237 | 8762.72 |
| bifunctional pyridoxal kinase/hydroxymethylpyrimidine kinase | DN590_00245 | Not Available | Negative | 44234 - 45100 | 31110.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

