Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | DN590_00160 | Not Available | Negative | 27483 - 28367 | 33376.2 |
| mfs transporter | DN590_00165 | Not Available | Negative | 28466 - 29722 | 46016.3 |
| purine-nucleoside phosphorylase | DN590_00170 | Not Available | Negative | 29779 - 30612 | 29430.6 |
| duf1471 domain-containing protein | DN590_00175 | Not Available | Negative | 30938 - 31207 | 9675.7 |
| duf302 domain-containing protein | DN590_00180 | Not Available | Negative | 31437 - 31832 | 14379.2 |
| hypothetical protein | DN590_00185 | Not Available | Negative | 31910 - 33001 | 38483.0 |
| Ncrna_class:other | Not Available | Not Available | Positive | 33014 - 33144 | Not Available |
| lysr family transcriptional regulator | DN590_00190 | Not Available | Negative | 33430 - 34356 | 34047.1 |
| bile acid:sodium symporter | DN590_00195 | Not Available | Positive | 34446 - 35444 | 36038.4 |
| hypothetical protein | DN590_00200 | Not Available | Negative | 35441 - 35659 | 8433.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

