Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate transport regulator pgtc | DN590_00020 | Not Available | Negative | 4061 - 5260 | 44419.4 |
| phosphoglycerate transporter pgtp | DN590_00030 | Not Available | Positive | 5676 - 7067 | 51010.3 |
| duf2545 family protein | DN590_00035 | Not Available | Negative | 7177 - 7419 | 8880.36 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 7810 - 7906 | Not Available |
| kdo(2)-lipid iv(a) palmitoleoyltransferase | DN590_00040 | Not Available | Positive | 7859 - 8779 | 35374.4 |
| duf1311 domain-containing protein | DN590_00045 | Not Available | Negative | 8821 - 9435 | 22203.3 |
| membrane protein ypdk | DN590_00050 | Not Available | Positive | 9779 - 9850 | 2704.57 |
| Ncrna_class:other | Not Available | Not Available | Positive | 10601 - 10733 | Not Available |
| alanine transaminase | DN590_00055 | Not Available | Negative | 9918 - 11156 | 46134.6 |
| sensor histidine kinase | DN590_00060 | Not Available | Positive | 11544 - 13241 | 62632.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

