Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| I protein | DN590_10825 | Not Available | Negative | 2209340 - 2210296 | 34823.1 |
| Virion morphogenesis protein | DN590_10830 | Not Available | Negative | 2210506 - 2211294 | 30646.5 |
| Hypothetical protein | DN590_10835 | Not Available | Negative | 2211287 - 2212855 | 57695.0 |
| Portal protein | DN590_10840 | Not Available | Negative | 2212855 - 2214438 | 59102.0 |
| Hypothetical protein | DN590_10845 | Not Available | Negative | 2214435 - 2215013 | 21367.7 |
| hypothetical protein | DN590_10850 | Not Available | Negative | 2215003 - 2215281 | 10716.0 |
| Hypothetical protein | DN590_10855 | Not Available | Negative | 2215274 - 2215648 | 13789.4 |
| Hypothetical protein | DN590_10860 | Not Available | Negative | 2215651 - 2215938 | 10367.5 |
| Hypothetical protein | DN590_10865 | Not Available | Negative | 2215951 - 2216256 | 11800.4 |
| C4-type zinc finger protein | DN590_10870 | Not Available | Negative | 2216257 - 2216463 | 7445.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

