Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail fiber protein | DN590_23660 | Not Available | Positive | 4744292 - 4744903 | 22240.8 |
| Tail fiber assembly protein | DN590_23665 | Not Available | Positive | 4744903 - 4745499 | 21644.3 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 4 - 119 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 35 - 2963 | Not Available |
| duf2058 domain-containing protein | DN590_00005 | Not Available | Positive | 173 - 712 | 20271.3 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 174 - 289 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 248 - 363 | Not Available |
| two-component system response regulator pgta | DN590_00010 | Not Available | Negative | 818 - 2065 | 47373.1 |
| two-component system sensor histidine kinase pgtb | DN590_00015 | Not Available | Negative | 2055 - 4064 | 75017.6 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 4313 - 4689 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

