Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN590_13880 | Not Available | Positive | 2776745 - 2777101 | 13658.4 |
| cell surface composition regulator glgs | DN590_13885 | Not Available | Negative | 2777135 - 2777341 | 8074.59 |
| bifunctional d-glycero-beta-d-manno-heptose-7-phosphate kinase/d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase hlde | DN590_13890 | Not Available | Negative | 2777709 - 2779142 | 50993.3 |
| bifunctional | DN590_13895 | Not Available | Negative | 2779202 - 2782042 | 108405.0 |
| inorganic triphosphatase | DN590_13900 | Not Available | Negative | 2782168 - 2783469 | 48341.9 |
| hypothetical protein | DN590_13905 | Not Available | Negative | 2783487 - 2783612 | 4649.7 |
| sh3 domain-containing protein | DN590_13910 | Not Available | Positive | 2783711 - 2784331 | 23098.8 |
| multifunctional cca addition/repair protein | DN590_13915 | Not Available | Positive | 2784394 - 2785629 | 46263.5 |
| undecaprenyl-diphosphate phosphatase | DN590_13920 | Not Available | Negative | 2785739 - 2786557 | 29464.2 |
| bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase | DN590_13925 | Not Available | Negative | 2786644 - 2787012 | 13678.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

