Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail tube protein | DN590_23610 | Not Available | Positive | 4736023 - 4736529 | 18456.8 |
| Hypothetical protein | DN590_23615 | Not Available | Positive | 4736588 - 4736887 | 11142.4 |
| Tail length tape measure protein | DN590_23620 | Not Available | Positive | 4736990 - 4738915 | 70039.9 |
| Putative tail protein gpu | DN590_23625 | Not Available | Positive | 4738912 - 4739382 | 17484.5 |
| Tail protein | DN590_23630 | Not Available | Positive | 4739357 - 4739572 | 7675.95 |
| Putative tail protein | DN590_23635 | Not Available | Positive | 4739574 - 4740692 | 40046.9 |
| Baseplate assembly protein | DN590_23640 | Not Available | Positive | 4740732 - 4741085 | 12809.4 |
| Putative phage tail protein | DN590_23645 | Not Available | Positive | 4741069 - 4741989 | 33436.4 |
| Tail protein | DN590_23650 | Not Available | Positive | 4741979 - 4742542 | 21020.6 |
| Tail fiber protein | DN590_23655 | Not Available | Positive | 4742535 - 4744295 | 62477.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

