Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN590_12895 | Not Available | Positive | 2609628 - 2610407 | 29182.1 |
| hypothetical protein | DN590_12900 | Not Available | Negative | 2610474 - 2610677 | 7429.54 |
| antirestriction protein arda | DN590_12905 | Not Available | Positive | 2610814 - 2611320 | 19532.8 |
| hypothetical protein | DN590_12910 | Not Available | Positive | 2611363 - 2611554 | 7395.89 |
| dna polymerase iii subunit theta | DN590_12915 | Not Available | Positive | 2611740 - 2612000 | 10194.9 |
| hypothetical protein | DN590_12920 | Not Available | Positive | 2612035 - 2612352 | 11732.0 |
| duf905 domain-containing protein | DN590_12930 | Not Available | Positive | 2612978 - 2613208 | 8874.41 |
| hypothetical protein | DN590_12935 | Not Available | Positive | 2613279 - 2615288 | 72466.6 |
| conjugation system sos inhibitor psib | DN590_12940 | Not Available | Positive | 2615331 - 2615762 | 15831.6 |
| plasmid sos inhibition protein a | DN590_12945 | Not Available | Positive | 2615759 - 2616487 | 28237.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

