Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Terminase large subunit | DN590_23560 | Not Available | Positive | 4726012 - 4728129 | 79619.1 |
| hypothetical protein | DN590_23565 | Not Available | Positive | 4728126 - 4728341 | 8260.77 |
| Portal protein | DN590_23570 | Not Available | Positive | 4728350 - 4729861 | 56055.1 |
| Head maturation protease | DN590_23575 | Not Available | Positive | 4729818 - 4731920 | 75033.2 |
| Hypothetical protein | DN590_23580 | Not Available | Positive | 4731993 - 4732328 | 11124.0 |
| Head-tail connector fii | DN590_23585 | Not Available | Positive | 4732328 - 4732684 | 12912.3 |
| Putative minor tail protein z | DN590_23590 | Not Available | Positive | 4732686 - 4733342 | 25520.8 |
| hypothetical protein | DN590_23595 | Not Available | Positive | 4733354 - 4733908 | 20275.5 |
| Baseplate assembly protein | DN590_23600 | Not Available | Positive | 4733901 - 4734518 | 22172.0 |
| Contractile tail sheath protein | DN590_23605 | Not Available | Positive | 4734557 - 4736026 | 52136.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

