Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein iv | DN590_12645 | Not Available | Negative | 2562730 - 2564331 | 56822.2 |
| methyl-accepting chemotaxis protein ii | DN590_12650 | Not Available | Negative | 2564375 - 2566030 | 59445.1 |
| dicarboxylate/amino acid:cation symporter | DN590_12655 | Not Available | Positive | 2566437 - 2567696 | 44341.6 |
| chemotaxis protein chew | DN590_12660 | Not Available | Negative | 2567773 - 2568276 | 18078.9 |
| chemotaxis protein chea | DN590_12665 | Not Available | Negative | 2568297 - 2570333 | 73676.1 |
| motility protein motb | DN590_12670 | Not Available | Negative | 2570338 - 2571267 | 34325.1 |
| flagellar motor stator protein mota | DN590_12675 | Not Available | Negative | 2571264 - 2572151 | 32002.4 |
| flagellar transcriptional regulator flhc | DN590_12680 | Not Available | Negative | 2572276 - 2572860 | 21803.7 |
| flagellar transcriptional regulator flhd | DN590_12685 | Not Available | Negative | 2572857 - 2573207 | 13326.2 |
| is110 family transposase | DN590_12695 | Not Available | Positive | 2573739 - 2574119 | 14017.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

