Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN590_23510 | Not Available | Negative | 4721098 - 4721514 | 14930.9 |
| Hypothetical protein | DN590_23515 | Not Available | Positive | 4721617 - 4721805 | 6981.12 |
| universal stress protein uspf | DN590_23520 | Not Available | Negative | 4722245 - 4722679 | 15596.1 |
| Putative holin | DN590_23525 | Not Available | Positive | 4723043 - 4723429 | 12921.5 |
| Putative holin | DN590_23530 | Not Available | Positive | 4723416 - 4723697 | 10318.8 |
| Endochitinase | DN590_23535 | Not Available | Positive | 4723697 - 4724326 | 22782.3 |
| Hypothetical protein | DN590_23540 | Not Available | Positive | 4724334 - 4724609 | 9538.18 |
| Hypothetical protein | DN590_23545 | Not Available | Positive | 4724554 - 4724763 | 7822.39 |
| Hypothetical protein | DN590_23550 | Not Available | Positive | 4724741 - 4724971 | 8363.0 |
| Terminase small subunit | DN590_23555 | Not Available | Positive | 4725502 - 4726008 | 18993.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

