Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| repressor lexa | DN590_11865 | Not Available | Negative | 2416256 - 2416864 | 22401.2 |
| diacylglycerol kinase | DN590_11870 | Not Available | Negative | 2416974 - 2417342 | 13320.5 |
| glycerol-3-phosphate 1-o-acyltransferase plsb | DN590_11875 | Not Available | Positive | 2417513 - 2419933 | 91298.8 |
| 4-hydroxybenzoate octaprenyltransferase | DN590_11880 | Not Available | Negative | 2419989 - 2420861 | 32522.7 |
| chorismate lyase | DN590_11885 | Not Available | Negative | 2420875 - 2421372 | 18728.8 |
| maltose operon protein malm | DN590_11890 | Not Available | Negative | 2421553 - 2422500 | 32701.2 |
| maltoporin lamb | DN590_11895 | Not Available | Negative | 2422614 - 2423969 | 50172.1 |
| maltose/maltodextrin abc transporter atp-binding protein malk | DN590_11900 | Not Available | Negative | 2424061 - 2425170 | 40782.7 |
| maltose/maltodextrin abc transporter substrate-binding protein male | DN590_11905 | Not Available | Positive | 2425531 - 2426721 | 43242.8 |
| maltose abc transporter permease malf | DN590_11910 | Not Available | Positive | 2426852 - 2428396 | 56918.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

