Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN590_11460 | Not Available | Positive | 2332308 - 2332982 | 25572.3 |
| lipase family protein | DN590_11465 | Not Available | Positive | 2333127 - 2335025 | 72798.5 |
| hypothetical protein | DN590_11470 | Not Available | Positive | 2335022 - 2335774 | 28542.3 |
| hypothetical protein | DN590_11475 | Not Available | Positive | 2335774 - 2336025 | 9735.92 |
| type vi secretion system tip protein vgrg | DN590_11480 | Not Available | Positive | 2336366 - 2338852 | 90922.7 |
| hypothetical protein | DN590_11485 | Not Available | Positive | 2339688 - 2341160 | 53476.1 |
| sulfatase modifying factor 1 | DN590_11490 | Not Available | Positive | 2341175 - 2342056 | 33255.6 |
| sulfatase modifying factor 1 | DN590_11495 | Not Available | Positive | 2342053 - 2342940 | 33485.8 |
| sulfatase modifying factor 1 | DN590_11500 | Not Available | Positive | 2342937 - 2343824 | 33251.5 |
| sulfatase modifying factor 1 | DN590_11505 | Not Available | Positive | 2343821 - 2344708 | 33224.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

