Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase iv subunit b | DN590_11205 | Not Available | Positive | 2276477 - 2278369 | 70148.6 |
| antibiotic biosynthesis monooxygenase | DN590_11210 | Not Available | Negative | 2278476 - 2278790 | 11513.9 |
| flavodoxin family protein | DN590_11215 | Not Available | Negative | 2278821 - 2279402 | 21712.8 |
| two-component system sensor histidine kinase qsec | DN590_11220 | Not Available | Negative | 2279512 - 2280861 | 50400.6 |
| two-component system response regulator qseb | DN590_11225 | Not Available | Negative | 2280858 - 2281517 | 24098.2 |
| tigr00156 family protein | DN590_11230 | Not Available | Positive | 2281666 - 2282064 | 14155.7 |
| dna topoisomerase iv subunit a | DN590_11235 | Not Available | Positive | 2282183 - 2284441 | 83828.2 |
| 1-acylglycerol-3-phosphate o-acyltransferase | DN590_11240 | Not Available | Positive | 2284637 - 2285374 | 27415.9 |
| cell division protein ftsp | DN590_11245 | Not Available | Positive | 2285446 - 2286858 | 51925.2 |
| potassium transporter trkg | DN590_11250 | Not Available | Negative | 2286875 - 2288350 | 54770.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

