Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparagine--trna ligase | DN590_10955 | Not Available | Negative | 2226740 - 2228140 | 52448.1 |
| nicotinate phosphoribosyltransferase | DN590_10960 | Not Available | Negative | 2228307 - 2229509 | 46051.1 |
| aminopeptidase n | DN590_10965 | Not Available | Positive | 2229776 - 2232388 | 98937.1 |
| aliphatic sulfonates abc transporter atp-binding protein | DN590_10970 | Not Available | Negative | 2232485 - 2233252 | 27608.7 |
| aliphatic sulfonate abc transporter permease ssuc | DN590_10975 | Not Available | Negative | 2233249 - 2234040 | 29035.2 |
| alkanesulfonate monooxygenase, fmnh(2)-dependent | DN590_10980 | Not Available | Negative | 2234051 - 2235196 | 41731.7 |
| aliphatic sulfonate abc transporter substrate-binding protein | DN590_10985 | Not Available | Negative | 2235193 - 2236167 | 35292.5 |
| nadph-dependent fmn reductase | DN590_10990 | Not Available | Negative | 2236160 - 2236735 | 21155.5 |
| quinone-dependent dihydroorotate dehydrogenase | DN590_10995 | Not Available | Positive | 2236978 - 2237988 | 36623.6 |
| cell division protein zapc | DN590_11000 | Not Available | Positive | 2238154 - 2238696 | 20371.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

