Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| envelope biogenesis factor elyc | DN590_10665 | Not Available | Negative | 2179753 - 2180517 | 27783.0 |
| trna uridine 5-oxyacetic acid(34) methyltransferase cmom | DN590_10670 | Not Available | Positive | 2180653 - 2181456 | 30532.6 |
| chromosome partition protein mukf | DN590_10675 | Not Available | Positive | 2181449 - 2182771 | 50541.7 |
| chromosome partition protein muke | DN590_10680 | Not Available | Positive | 2182752 - 2183456 | 27025.1 |
| chromosome partition protein mukb | DN590_10685 | Not Available | Positive | 2183456 - 2187916 | 170036.0 |
| l,d-transpeptidase | DN590_10695 | Not Available | Positive | 2188896 - 2190647 | 64700.4 |
| duf882 domain-containing protein | DN590_10705 | Not Available | Positive | 2190825 - 2191373 | 20240.4 |
| mbl fold metallo-hydrolase | DN590_10710 | Not Available | Positive | 2191402 - 2192049 | 23630.3 |
| aspartate/tyrosine/aromatic aminotransferase | DN590_10715 | Not Available | Negative | 2192103 - 2193293 | 43519.6 |
| porin ompf | DN590_10720 | Not Available | Negative | 2193477 - 2194517 | 37413.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

