Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | DN590_10505 | Not Available | Positive | 2143680 - 2144297 | 23180.0 |
| tautomerase ppta | DN590_10510 | Not Available | Positive | 2144337 - 2144564 | 8376.08 |
| alkyl/aryl-sulfatase | DN590_10515 | Not Available | Negative | 2144602 - 2146578 | 72419.6 |
| hypothetical protein | DN590_10520 | Not Available | Negative | 2146793 - 2147365 | 20987.3 |
| n-hydroxyarylamine o-acetyltransferase | DN590_10525 | Not Available | Positive | 2147523 - 2148368 | 32163.3 |
| phzf family isomerase | DN590_10530 | Not Available | Negative | 2148427 - 2149320 | 32079.3 |
| respiratory nitrate reductase subunit gamma | DN590_10535 | Not Available | Negative | 2149420 - 2150100 | 25667.1 |
| nitrate reductase molybdenum cofactor assembly chaperone | DN590_10540 | Not Available | Negative | 2150097 - 2150792 | 25952.8 |
| nitrate reductase subunit beta | DN590_10545 | Not Available | Negative | 2150792 - 2152336 | 58698.3 |
| nitrate reductase subunit alpha | DN590_10550 | Not Available | Negative | 2152333 - 2156073 | 140242.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

