Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucan biosynthesis protein d | DN590_10245 | Not Available | Positive | 2089634 - 2091289 | 62822.4 |
| duf465 domain-containing protein | DN590_10255 | Not Available | Positive | 2091457 - 2091681 | 8742.51 |
| alanine racemase | DN590_10260 | Not Available | Negative | 2091748 - 2092974 | 44329.5 |
| 50s ribosomal protein l7/l12-serine acetyltransferase | DN590_10265 | Not Available | Positive | 2093193 - 2093738 | 20944.1 |
| hypothetical protein | DN590_10270 | Not Available | Negative | 2093730 - 2094710 | 35854.2 |
| dicarboxylate transporter/tellurite-resistance protein teha | DN590_10275 | Not Available | Positive | 2094824 - 2095825 | 36450.2 |
| tellurite resistance methyltransferase tehb | DN590_10280 | Not Available | Positive | 2095825 - 2096421 | 22102.3 |
| duf3313 domain-containing protein | DN590_10285 | Not Available | Positive | 2096577 - 2097251 | 24627.5 |
| dmt family transporter | DN590_10290 | Not Available | Negative | 2097289 - 2098197 | 33226.5 |
| arac family transcriptional regulator | DN590_10295 | Not Available | Positive | 2098382 - 2099251 | 32473.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

