Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Replication protein | DN590_19335 | Not Available | Negative | 3901553 - 3903943 | 91251.4 |
| Trar/dksa transcriptional regulator | DN590_19340 | Not Available | Negative | 3903963 - 3904190 | 8420.28 |
| Hypothetical protein | DN590_19345 | Not Available | Negative | 3904190 - 3904417 | 8573.35 |
| Hypothetical protein | DN590_19350 | Not Available | Negative | 3904485 - 3904826 | 12838.8 |
| Cell division blocking protein | DN590_19355 | Not Available | Negative | 3904790 - 3904990 | 7523.23 |
| Bacteriophage regulatory protein cii | DN590_19360 | Not Available | Negative | 3904998 - 3905507 | 18288.2 |
| Rha family transcriptional regulator | DN590_19365 | Not Available | Negative | 3905540 - 3905782 | 9270.25 |
| Repressor protein | DN590_19370 | Not Available | Positive | 3905906 - 3906535 | 23196.9 |
| Site-specific integrase | DN590_19375 | Not Available | Positive | 3906539 - 3907567 | 38658.9 |
| Atp-binding protein | DN590_23405 | Not Available | Positive | 4706963 - 4707501 | 20262.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

