Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium-transporting atpase subunit f | DN590_09835 | Not Available | Negative | 2004867 - 2004956 | 3071.95 |
| duf2517 family protein | DN590_09840 | Not Available | Positive | 2005265 - 2005471 | 8228.0 |
| duf1722 domain-containing protein | DN590_09845 | Not Available | Positive | 2005569 - 2006123 | 21984.6 |
| deoxyribodipyrimidine photo-lyase | DN590_09850 | Not Available | Positive | 2006142 - 2007560 | 53701.8 |
| mfs transporter | DN590_09855 | Not Available | Negative | 2007814 - 2009295 | 53899.8 |
| nif3-like dinuclear metal center hexameric protein | DN590_09860 | Not Available | Positive | 2009585 - 2010328 | 27048.1 |
| hypothetical protein | DN590_09865 | Not Available | Positive | 2010344 - 2011000 | 24205.2 |
| allophanate hydrolase subunit 2 family protein | DN590_09870 | Not Available | Positive | 2010994 - 2011926 | 34179.0 |
| lamb/ycsf family protein | DN590_09875 | Not Available | Positive | 2011916 - 2012650 | 25696.5 |
| duf969 domain-containing protein | DN590_09880 | Not Available | Positive | 2012703 - 2013425 | 25892.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

