Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin flda | DN590_09785 | Not Available | Negative | 1992801 - 1993331 | 19709.9 |
| lexa regulated protein | DN590_09790 | Not Available | Negative | 1993487 - 1993774 | 11018.3 |
| esterase | DN590_09795 | Not Available | Negative | 1993903 - 1994676 | 28743.4 |
| replication initiation negative regulator seqa | DN590_09800 | Not Available | Positive | 1994871 - 1995413 | 20283.5 |
| alpha-d-glucose phosphate-specific phosphoglucomutase | DN590_09805 | Not Available | Positive | 1995438 - 1997078 | 58133.9 |
| two-component system response regulator kdpe | DN590_09810 | Not Available | Negative | 1997175 - 1997852 | 25322.6 |
| two-component system sensor histidine kinase kdbd | DN590_09815 | Not Available | Negative | 1997849 - 2000533 | 98596.0 |
| potassium-transporting atpase subunit kdpc | DN590_09820 | Not Available | Negative | 2000544 - 2001110 | 19979.1 |
| k(+)-transporting atpase subunit b | DN590_09825 | Not Available | Negative | 2001119 - 2003167 | 72313.6 |
| potassium-transporting atpase subunit kdpa | DN590_09830 | Not Available | Negative | 2003188 - 2004867 | 59535.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

