Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Capsid protein | DN590_19285 | Not Available | Negative | 3893178 - 3894245 | 39822.0 |
| Capsid scaffolding protein | DN590_19290 | Not Available | Negative | 3894262 - 3895095 | 30654.9 |
| Terminase atpase subunit family protein | DN590_19295 | Not Available | Positive | 3895238 - 3897004 | 67079.6 |
| Capsid packaging protein | DN590_19300 | Not Available | Positive | 3897001 - 3898035 | 39144.9 |
| hypothetical protein | DN590_19305 | Not Available | Negative | 3898072 - 3898941 | 33221.6 |
| hypothetical protein | DN590_19310 | Not Available | Negative | 3898955 - 3899590 | 23279.8 |
| hypothetical protein | DN590_19315 | Not Available | Negative | 3899599 - 3900360 | 28993.9 |
| Hypothetical protein | DN590_19320 | Not Available | Negative | 3900627 - 3900887 | 9989.76 |
| Dna damage inducible protein | DN590_19325 | Not Available | Negative | 3900961 - 3901194 | 9087.05 |
| Hypothetical protein | DN590_19330 | Not Available | Negative | 3901206 - 3901394 | 7298.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

