Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gln | Not Available | Not Available | Positive | 1974040 - 1974114 | Not Available |
| Trna-gln | Not Available | Not Available | Positive | 1974152 - 1974226 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 1974250 - 1974334 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1974344 - 1974420 | Not Available |
| asparagine synthase b | DN590_09700 | Not Available | Negative | 1974645 - 1976309 | 62539.1 |
| hypothetical protein | DN590_09705 | Not Available | Positive | 1976227 - 1976439 | 8053.98 |
| had-iia family hydrolase | DN590_09710 | Not Available | Negative | 1976561 - 1977313 | 27161.7 |
| rok family transcriptional regulator | DN590_09715 | Not Available | Negative | 1977371 - 1978591 | 44523.1 |
| n-acetylglucosamine-6-phosphate deacetylase | DN590_09720 | Not Available | Negative | 1978600 - 1979748 | 40908.4 |
| glucosamine-6-phosphate deaminase | DN590_09725 | Not Available | Negative | 1979810 - 1980610 | 29632.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

