Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| apolipoprotein n-acyltransferase | DN590_09630 | Not Available | Negative | 1966534 - 1968072 | 57443.4 |
| magnesium/cobalt transporter corc | DN590_09635 | Not Available | Negative | 1968097 - 1968975 | 33424.6 |
| rrna maturation rnase ybey | DN590_09640 | Not Available | Negative | 1969134 - 1969607 | 17694.8 |
| phoh family protein | DN590_09645 | Not Available | Negative | 1969604 - 1970689 | 40873.1 |
| hypothetical protein | DN590_09650 | Not Available | Positive | 1970663 - 1970860 | 7399.72 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | DN590_09655 | Not Available | Negative | 1970857 - 1972287 | 53823.4 |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | DN590_09660 | Not Available | Positive | 1972433 - 1973608 | 42872.9 |
| Trna-gln | Not Available | Not Available | Positive | 1973713 - 1973787 | Not Available |
| Trna-gln | Not Available | Not Available | Positive | 1973824 - 1973898 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1973942 - 1974018 | Not Available |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

