Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxy-phosphogluconate aldolase | DN590_09430 | Not Available | Positive | 1928110 - 1928853 | 25839.0 |
| lipoprotein nlpa | DN590_09435 | Not Available | Positive | 1929069 - 1929887 | 29402.3 |
| eama family transporter | DN590_09440 | Not Available | Negative | 1929916 - 1930818 | 32238.5 |
| lysr family transcriptional regulator | DN590_09445 | Not Available | Negative | 1930844 - 1931788 | 34602.9 |
| sdr family nad(p)-dependent oxidoreductase | DN590_09450 | Not Available | Positive | 1931935 - 1932711 | 27324.0 |
| antibiotic biosynthesis monooxygenase | DN590_09455 | Not Available | Negative | 1932751 - 1933056 | 11441.9 |
| zinc-binding alcohol dehydrogenase family protein | DN590_09460 | Not Available | Negative | 1933058 - 1934065 | 36045.2 |
| lysr family transcriptional regulator | DN590_09465 | Not Available | Positive | 1934170 - 1935072 | 33810.7 |
| dipeptidase | DN590_09470 | Not Available | Negative | 1935109 - 1936605 | 55854.0 |
| hypothetical protein | DN590_09475 | Not Available | Negative | 1936948 - 1937412 | 17462.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

