Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ilvb operon leader peptide ivbl | DN590_09280 | Not Available | Positive | 1899034 - 1899132 | 3263.17 |
| acetolactate synthase large subunit | DN590_09285 | Not Available | Positive | 1899240 - 1900928 | 60550.4 |
| acetolactate synthase isozyme 1 small subunit | DN590_09290 | Not Available | Positive | 1900932 - 1901222 | 11126.5 |
| deor family transcriptional regulator | DN590_09295 | Not Available | Negative | 1901224 - 1902009 | 28899.9 |
| ribokinase | DN590_09300 | Not Available | Positive | 1902335 - 1903255 | 33184.8 |
| l-fucose:h+ symporter permease | DN590_09305 | Not Available | Positive | 1903283 - 1904599 | 48475.3 |
| duf4432 family protein | DN590_09310 | Not Available | Positive | 1904611 - 1905624 | 38047.3 |
| transcriptional regulator uhpa | DN590_09315 | Not Available | Positive | 1905778 - 1906371 | 20931.7 |
| signal transduction histidine-protein kinase/phosphatase uhpb | DN590_09320 | Not Available | Positive | 1906368 - 1907870 | 56042.8 |
| mfs transporter family glucose-6-phosphate receptor uhpc | DN590_09325 | Not Available | Positive | 1907880 - 1909208 | 48522.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

