Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN590_09230 | Not Available | Positive | 1889348 - 1889695 | 12801.2 |
| duf202 domain-containing protein | DN590_09235 | Not Available | Positive | 1889685 - 1890047 | 13629.9 |
| anaerobic sulfatase maturase | DN590_09240 | Not Available | Positive | 1890062 - 1891156 | 41244.1 |
| d-serine ammonia-lyase | DN590_09245 | Not Available | Negative | 1891169 - 1892491 | 47570.8 |
| d-serine transporter dsdx | DN590_09250 | Not Available | Negative | 1892508 - 1893845 | 46949.9 |
| dna-binding transcriptional regulator dsdc | DN590_09255 | Not Available | Positive | 1894075 - 1895001 | 34840.5 |
| hypothetical protein | DN590_09260 | Not Available | Positive | 1895080 - 1896162 | 39986.1 |
| multidrug transporter emrd | DN590_09265 | Not Available | Negative | 1896089 - 1897273 | 42143.4 |
| eama family transporter | DN590_09270 | Not Available | Negative | 1897465 - 1898298 | 29239.8 |
| type i toxin-antitoxin system toxin tisb | DN590_09275 | Not Available | Negative | 1898422 - 1898511 | 3181.26 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

