Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate transport system regulator phou | DN590_09075 | Not Available | Positive | 1856394 - 1857119 | 27478.3 |
| 6-phosphogluconate phosphatase | DN590_09080 | Not Available | Negative | 1857241 - 1857906 | 24543.6 |
| ncs2 family permease | DN590_09085 | Not Available | Positive | 1858074 - 1859411 | 46674.6 |
| nad(p)h-dependent oxidoreductase | DN590_09090 | Not Available | Negative | 1859468 - 1860034 | 20295.7 |
| hypothetical protein | DN590_09095 | Not Available | Negative | 1860065 - 1860811 | 27599.2 |
| hth-type transcriptional regulator yidz | DN590_09100 | Not Available | Negative | 1860978 - 1861937 | 36876.8 |
| multidrug transporter mdtl | DN590_09105 | Not Available | Negative | 1861906 - 1863087 | 41777.5 |
| lipase family protein | DN590_09110 | Not Available | Positive | 1863272 - 1865323 | 77493.0 |
| hypothetical protein | DN590_09115 | Not Available | Positive | 1865682 - 1866095 | 15327.3 |
| hypothetical protein | DN590_09120 | Not Available | Positive | 1866464 - 1866859 | 14862.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

